Publications Team Rice
Arra Y., Loo E.P.I., Devanna B.N., Stiebner M. & Frommer W.B. (2024) A step-by step protocol for crossing and marker assisted breeding of Asian and African rice varieties. Bioprotocols, in revision.
Loo E.P.I., Szurek B., Arra Y., Stiebner M., Buchholzer M., Vera Cruz C.M. & Frommer W.B. (2024) Sampling bias and evaluation of severity in the fight against crop diseases. Mol. Plant Microbe Interact., in revision.
Schenstnyi K., Zhang Z., Liu B., Nakamura M., Schepler-Luu V., Loo E.P.I., Yang B. & Frommer W.B. (2024) Loss-of-function mutation in the polyamine transporter gene OsLAT5 as a selectable marker for genome editing. bioRxiv, Plant Methods, in revision.
Arra Y., Auguy F., Stiebner M., Chéron S., Wudick M., Miras M., Schepler-Luu V.T., Cunnac, S., Frommer W.B. & Albar F. (2023) Rice Yellow Mottle Virus resistance by genome editing of the Oryza sativa L. ssp. japonica nucleoporin gene OsCPR5.1 but not OsCPR5.2. bioRxiv. Plant Biotech J. in press.
Schepler-Luu V.T., Sciallano C., Stiebner M., Ji C., Boulard G., Diallo A., Auguy F., Char S.N., Arra Y., Schenstnyi K., Marcel Buchholzer M., Loo E.P.I., Bilaro A.L., Lihepanyama D., Mkuya M., Murori R., Oliva R., Cunnac S., Yang B., Szurek. B. & Frommer W.B. (2023) Genome editing of an African elite rice variety confers resistance against endemic and emerging Xanthomonas oryzaepv. oryzae strains. eLife, 12:e84864. doi
Buchholzer, M.; Frommer, W. B. An Increasing Number of Countries Regulate Genome Editing in Crops. New Phytologist 2022, nph.18333. https://doi.org/10.1111/nph.18333
Wu, L.; Eom, J.; Isoda, R.; Li, C.; Char, S. N.; Luo, D.; Schepler‐Luu, V.; Nakamura, M.; Yang, B.; Frommer, W. B. OsSWEET11b , a Potential Sixth Leaf Blight Susceptibility Gene Involved in Sugar Transport‐dependent Male Fertility. New Phytologist 2022, 234 (3), 975–989. https://doi.org/10.1111/nph.18054
Miras, M.; Pottier, M.; Schladt, T. M.; Ejike, J. O.; Redzich, L.; Frommer, W. B.; Kim, J.-Y. Plasmodesmata and Their Role in Assimilate Translocation. Journal of Plant Physiology 2022, 270, 153633. https://doi.org/10.1016/j.jplph.2022.153633
Sadoine, M.; Long, J.; Song, C.; Arra, Y.; Frommer, W. B.; Yang, B. Sucrose-Dependence of Sugar Uptake, Quorum Sensing and Virulence of the Rice Blight Pathogen Xanthomonas Oryzae Pv. Oryzae; preprint; Plant Biology, 2021. https://doi.org/10.1101/2021.08.22.457195
Zöllner, N. R.; Bezrutczyk, M.; Laureyns, R.; Nelissen, H.; Simon, R.; Frommer, W. B. An RNA in Situ Hybridization Protocol Optimized for Monocot Tissue. STAR Protocols 2021, 2 (2), 100398. https://doi.org/10.1016/j.xpro.2021.100398
Kim, J.-Y.; Symeonidi, E.; Pang, T. Y.; Denyer, T.; Weidauer, D.; Bezrutczyk, M.; Miras, M.; Zöllner, N.; Hartwig, T.; Wudick, M. M.; Lercher, M.; Chen, L.-Q.; Timmermans, M. C. P.; Frommer, W. B. Distinct Identities of Leaf Phloem Cells Revealed by Single Cell Transcriptomics. The Plant Cell 2021, 33 (3), 511–530. https://doi.org/10.1093/plcell/koaa060
Bezrutczyk, M.; Zöllner, N. R.; Kruse, C. P. S.; Hartwig, T.; Lautwein, T.; Köhrer, K.; Frommer, W. B.; Kim, J.-Y. Evidence for Phloem Loading via the Abaxial Bundle Sheath Cells in Maize Leaves. The Plant Cell 2021, 33 (3), 531–547. https://doi.org/10.1093/plcell/koaa055
Schmidt, S. M.; Belisle, M.; Frommer, W. B. The Evolving Landscape around Genome Editing in Agriculture: Many Countries Have Exempted or Move to Exempt Forms of Genome Editing from GMO Regulation of Crop Plants. EMBO Reports 2020, 21 (6). https://doi.org/10.15252/embr.202050680
Luu, V.; Stiebner, M.; Maldonado, P.; Valdés, S.; Marín, D.; Delgado, G.; Laluz, V.; Wu, L.-B.; Chavarriaga, P.; Tohme, J.; Slamet-Loedin, I.; Frommer, W. Efficient Agrobacterium-Mediated Transformation of The Elite–Indica Rice Variety Komboka. BIO-PROTOCOL 2020, 10 (17). https://doi.org/10.21769/BioProtoc.3739
Oliva, R.; Ji, C.; Atienza-Grande, G.; Huguet-Tapia, J. C.; Perez-Quintero, A.; Li, T.; Eom, J.-S.; Li, C.; Nguyen, H.; Liu, B.; Auguy, F.; Sciallano, C.; Luu, V. T.; Dossa, G. S.; Cunnac, S.; Schmidt, S. M.; Slamet-Loedin, I. H.; Vera Cruz, C.; Szurek, B.; Frommer, W. B.; White, F. F.; Yang, B. Broad-Spectrum Resistance to Bacterial Blight in Rice Using Genome Editing. Nat Biotechnol 2019, 37 (11), 1344–1350. https://doi.org/10.1038/s41587-019-0267-z
Eom, J.-S.; Luo, D.; Atienza-Grande, G.; Yang, J.; Ji, C.; Thi Luu, V.; Huguet-Tapia, J. C.; Char, S. N.; Liu, B.; Nguyen, H.; Schmidt, S. M.; Szurek, B.; Vera Cruz, C.; White, F. F.; Oliva, R.; Yang, B.; Frommer, W. B. Diagnostic Kit for Rice Blight Resistance. Nat Biotechnol 2019, 37 (11), 1372–1379. https://doi.org/10.1038/s41587-019-0268-y
Yang, J.; Luo, D.; Yang, B.; Frommer, W. B.; Eom, J. SWEET 11 and 15 as Key Players in Seed Filling in Rice. New Phytol 2018, 218 (2), 604–615. https://doi.org/10.1111/nph.15004
Bezrutczyk, M.; Yang, J.; Eom, J.; Prior, M.; Sosso, D.; Hartwig, T.; Szurek, B.; Oliva, R.; Vera‐Cruz, C.; White, F. F.; Yang, B.; Frommer, W. B. Sugar Flux and Signaling in Plant–Microbe Interactions. Plant J 2018, 93 (4), 675–685. https://doi.org/10.1111/tpj.13775